scarcc
Basic Setup
1. Harcombe Lab Mutualism Model Setup
2. Modifying E.coli Carbon Byproduct Secretion Profile
3. Preparing Single Gene Target and Double Gene Combinations
4. Stoichiometry Scaling
Simulation Procedures
1. Deriving Alpha Table from FBA
2. Simulation Workflow
3. Checkerboard simulation
Data Analysis
1. Preprocessing Flux Data for Plots
2. Checkerboard plots
3. Analyzing carbon allocation profile
scarcc
Index
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Index